VBASE2 - the integrative germ-line V gene database

Welcome to VBASE2!

General Information

VBASE2 ID

musIGKV188

Class

class 1: genomic and rearranged references

Functionality

functional gene

V Gene Name(s)

8-19, IGKV8-19*01

V Gene Family

Igk-V8

Last update

2007-05-17

Nucleotide Sequence

Sequence

Features

Protein Translation

> musIGKV188 300 bp protein translation
DIVMTQSPSSLTVTAGEKVTMSCKSSQSLLNSGNQKNYLTWYQQKPGQPPKLLIYWASTR
ESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSY

Nucleotide Sequence Structure

FR1	1..78	CDR1	79..114	1st_CYS	67..69
FR2	115..165	CDR2	166..174	CONSERVED_TRP	121..123
FR3	175..282	CDR3	283..>300	2nd_CYS	280..282

Source References

Genomic Sequence

Ensembl:	Chr6 (70270759..70270460)
EMBL:	AC158672 (171681..171382), AY657027 (226419..226120), CAAA01188761 (3884..3585), CAAA01150589 (2215..1916), CAAA01102678 (21200..20901), AAHY01054133 (4060..3761), AY591677, Y15980

Rearranged Sequence

EMBL:

M34743, U37904, L09018, AY603674, AY603672, AY603667, M34744, M34741, M34740, U37902, U37900, U37899, U37898, U37896, U37895, U37894, U37893, U37892, U37891, M34739, M34742, U37890, AY603675

Cross References

IMGT

MMY15980, MMIGVABT, MMIGKACS, MMIGKACR, MMIGKACQ, MMIGKACP, MMIGKACO, MMIGKACN, MMIGKACJ, MMIGH144K, AY591677

KABAT (ftp KABAT)

KABID_042770, KABID_042767, KABID_042763, KABID_038702, KABID_005492, KABID_005491, KABID_005490, KABID_005489, KABID_005488, KABID_005486, KABID_005485, KABID_005484, KABID_005483