VBASE2 - the integrative germ-line V gene database

Welcome to VBASE2!

General Information

VBASE2 ID

musIGKV171

Class

class 1: genomic and rearranged references

Functionality

functional gene

V Gene Name(s)

B1P8x(2013)7b-2, 23-45, IGKV5-45*01

V Gene Family

Igk-V23

Last update

2007-05-17

Nucleotide Sequence

Sequence

Features

Protein Translation

> musIGKV171 282 bp protein translation
DIVLTQSPATLSVTPGDRVSLSCRASQSISNYLHWYQQKSHESPRLLIKYASQSISGIPS
RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSW

Nucleotide Sequence Structure

FR1	1..78	CDR1	79..96	1st_CYS	67..69
FR2	97..147	CDR2	148..156	CONSERVED_TRP	103..105
FR3	157..264	CDR3	265..>282	2nd_CYS	262..264

Source References

Genomic Sequence

Ensembl:	Chr6 (69705614..69705333)
EMBL:	AC155333 (155200..155481), AY657026 (171943..171662), CAAA01200182 (89728..89447), AAHY01555114 (307..588), AAHY01054101 (72734..72453), AY591638, AJ235974

Rearranged Sequence

EMBL:

X86546

Cross References

IMGT

MMVL3E6, MMU235974, MMIG23RS, AY591638

KABAT (ftp KABAT)

KABID_042770, KABID_042767, KABID_042763, KABID_007040

Home

Quick Search

Direct Query

DNAPLOT Query

Fab Analysis New!

Documentation / Help

V Gene Statistics

Download

Disclaimer

by Ida Retter,

Svetlana Mollova

and Werner Müller

Last Database Update:

2006-07-06

Contact:

info@vbase2.org

Hosted by:

EU-GENE