VBASE2 - the integrative germ-line V gene database

Welcome to VBASE2!

General Information

VBASE2 ID

musIGKV108

Class

class 1: genomic and rearranged references

Functionality

functional gene

V Gene Name(s)

Ig-V9a, 9-126, cw9, IGKV9-124*01

V Gene Family

Igk-V9/10

Last update

2007-05-17

Nucleotide Sequence

Sequence

Features

Protein Translation

> musIGKV108 282 bp protein translation
DIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPK
RFSGSRSGSDYSLTISSLESEDFADYYCLQYASY

Nucleotide Sequence Structure

FR1	1..78	CDR1	79..96	1st_CYS	67..69
FR2	97..147	CDR2	148..156	CONSERVED_TRP	103..105
FR3	157..264	CDR3	265..>282	2nd_CYS	262..264

Source References

Genomic Sequence

Ensembl:	Chr6 (67871938..67871657)
EMBL:	AC140385 (109724..109443), AC122260 (195552..195833), AY657022 (356486..356205), CAAA01118872 (35213..34932), AAHY01054010 (35179..34898), AJ231248, AY591742

Rearranged Sequence

EMBL:

X02177

Cross References

IMGT

MMU231248, MMIGGVJ1, AY591742, AF003294

KABAT (ftp KABAT)

KABID_042770, KABID_042767, KABID_042763, KABID_033935, KABID_019648

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V Gene Statistics

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Disclaimer

by Ida Retter,

Svetlana Mollova

and Werner Müller

Last Database Update:

2006-07-06

Contact:

info@vbase2.org

Hosted by:

EU-GENE